Browse of TCMCG027C26727 protein

CDS

Accession Number	TCMCG027C26727
gbkey	CDS
Protein Id	XP_018805298.1
Location	complement(join(5578826..5578940,5579331..5579716,5579805..5579990,5580555..5580731,5580951..5581082,5581249..5581479,5582364..5582441,5582539..5582604,5582720..5582800,5583423..5584207,5584851..5585041,5589588..5589682,5590843..5590965,5591681..5591758,5592493..5592621,5593664..5593798,5594129..5594248,5594386..5594437,5594966..5595097,5596296..5596348,5596624..5596719,5596899..5597044,5601546..5601681,5603185..5603338,5604132..5604278,5604703..5605025))
Gene	LOC108979156
GeneID	108979156
Organism	Juglans regia

Protein

Length	1448aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA350852
db_source	XM_018949753.2
Definition	cleavage and polyadenylation specificity factor subunit 1-like isoform X1 [Juglans regia]

EGGNOG-MAPPER Annotation

COG_category	A
Description	Cleavage and polyadenylation specificity factor
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03019        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K14401        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03015        [VIEW IN KEGG] map03015        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0003729        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006378        [VIEW IN EMBL-EBI] GO:0006379        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006397        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016071        [VIEW IN EMBL-EBI] GO:0031123        [VIEW IN EMBL-EBI] GO:0031124        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043631        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0090305        [VIEW IN EMBL-EBI] GO:0090501        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGAGCTTCGCGGCATACAAGATGATGCAGTGGCCGACCGGGATCGATAACTGCGCTTCGGGGTTCATCACCCATTCCCGCGCTGATTTCGTCCCCCGAATCCCTCCGATCCAGACCGATGACCTTGAGTCCGACTGGACCCACCGCCGCGGCATCGGTCCGGTCCCCAACCTCGTCGTCACTGCTGCTAATATCCTCGAGCTGTACGTCGTTAGAGTACAAGAAGAGGGCAGCAGAGAGTCCAGGTCTTCCTCGGAAACCAAGCGCGGTGGCGTCATGGATGGAATCTCCGGGTCCTCGCTCGAGTTGGTTTCCCATTATAGGTTGCATGGTAATGTGGAATCAATGGCAGTATTGCCCCTTGGAGTTGGTGATGGTTCTAGGATGAGAGATTCTATTATTTTAACCTTTCAAGATGCAAAAATTTCTGTTCTGGAGTTTGATGATTCAATCCATGGACTTCGTACGAGCTCTATGCACTGCTTTGAGGGTCCAGAGTGGCTTCATTTGAAAAGAGGTAGAGAATCATTTGCTAGAGGCCCGTTGGTAAAGGTTGATCCTCAGGGGAGGTGTGGCGGTGTTCTTGTTTATGATTTGCAAATGATAATACTTAAGGCTGCTCAGGATGGGTCTGGTTTGGTTGGGGATGATGACGCTTTTGGTTCTGGGGTTGCTGTTTCTGCTCGAGTTGAGTCATCCTTCCTAATTAATTTACGAGATTTAGACATGAAGCATGTTAAGGACTTCATATTTGTACATGGTTATATTGAGCCTGTGATGGTCATACTTCATGAGCGGGAGCCGACTTGGGCTGGGCGTGTGTCTTGGAAGCACCATACTTGCATGATTTCTGCACTCAGTATCAGCACATCTATGAAGCAGCATCCCCTTATATGGTCAGCCGTTAATCTCCCTCATGATGCATACAAGCTACTTGCAGTCCCTTCTCCTATTGGTGGTGTTCTTGTGATTGGTGCAAATTCTATTCACTATCATAGTCAGTCAGCCTCATGTGCGTTGGCTTTGAACAATTATGCGGTTCCTGTTGACAGCAGTCAGGAGATGCCGAGATCAAGTTTTAGTGTAGAGCTTGATGTTGCCAATGCAACTTGGTTATTGACTGATGTGGCCTTGGTGTCAACAAAAACTGGGGAACTGCTTTTACTGACCCTGGTTTATGATGGCCGGGTTGTGTACAGACTTGATCTTTCAAAATCTAAAGCTTCGGTGCTTACATCGGGGATTACAACAATTGGGAACTCCTTTTTTTTTCTGGGCAGCCGGTTGGGAGATAGTTTGCTTGTGCAATTTACTTGTGGATTGGGTTCTGCGATACTGTCATCTGGTCAAAAGGAAGAGGTTGGAGATATCGAAGGTGATGCCCCTCCAGTAAAGCGATTGCGAAGATCATCTTCGGACGCTTTGCAAGATATGGTTAGCGGTGATGAGATTTCCTTGTATGGCTCTGCTCCAAATAATGCAGATTCAACACAGAAAACCTTCTCATTTGCTGTGAGGGATTCATTGATTAATGTTGGTCCTTTGAAGGACTTCTCTTATGGTTTAAGGATAAATGCAGATGCAAATGCAACTGGAGTTTCCAAACAAAGTAACTATGAACTGGTATGTTGTTCTGGTCATGGAAAGAATGGTGCACTATGTGTTCTTCGGCAGTCGATTCGCCCAGAAATGATTACTGAGGTTGAACTACCTGGTTGCACAGGAATTTGGACTGTCTACCACAAGAACGCTCGTGGTCAACTGGCCACTGACGATAATGAGTATCATGCCTATCTGATAATAAGTCTTGAGGCTCGTACAATGGTACTTGAAACGGCTGATCTTCTGACTGAAGTTACTGAAAGTGTTGACTACTTTGTGCAAGGGAGAACACTTGCTGCAGGGAATTTATTTGGAAGGCGTCGAGTTGTCCAGGTCTTTGAACGTGGTGCTCGAATTTTAGATGGTTCTTTTATGACTCAAGATCTAAATGTTGGAGTACCAAACTCTGAATCTGGTTCTGAGAGTTCCACTGTATTGTCTGTCTCTATCGCTGATCCATATGTGTTACTGAGAATGACTGATGGAAGCATTCGGCTGCTTGTTGGAGATCCTTTAACTTGCACTGTTTCCATGTACACTCCATCTTCTTTTGAGACCTCAAAGAAATTCGTATCTGCCTGTACGCTGTATCATGATAAAGGACCTGAGCCATGGCTCCGGAAGACAAGTACTGATGCATGGCTTTCTACAGGAATAAGTGAGGCAATTGATGGTGCCGATGGTGCACCACATGATCAGGGTGATATATATTGTGTTGTTTGTTATGAAAGTGGTGCACTCGAAATATTAGATGTGCCTAACTTCAATTGTGTTTTTTCTGCGGAAAAGTTCATGTCTGGGAATCCCCTCCTTGTTGATGCATTTATGCCAGAACCAGCCAAAGATATTGAAGTGACGAAGAGAAGTTCCGAAGAAGTTACTGGCCAAGGCAGGAAAGAAAGTACACAGAACATGAAGGTTGTTGAGTTGGCCATGCAGAGATGGGCAGGACAGCATAGCCGCCCTTTCCTTTTTGGGATATTGAGTGATGGAACAATTCTTTGCTACCACGCATATTTATATGAAGGTGCTGAGAGTAACTCTAGAGTTGAAGATTCAGCTTCTGTACAGAATTCTGGTGGTTTAAGTAGCATCAGTGCTTCTAGACTTAGAAATTTGAGATTTGTCCGTGTCCCCTTGGACACGTATGCAAGGGAGGAGACACCAAGTGGGTCGCCATGCCAAAGAATTACCATTTTCAAGAATATTGGTGGCCACCAAGGCTTGTTCCTTTCTGGATCAAGACCAGCATGGTTTATGGTATTCAGGGAGCGGCTTCGAGTTCATCCACAGCTATGCGACGGATGTATTGTTGCCTTCACTGTTCTCCACAATGTTAATTGCAATCATGGGCTCATATATGTTACATCACAGGGCATTTTGAAAATTTGCCAACTGCCATCTGTATCAAGCTATGACAACTATTGGCCAGTACAAAAAATTCCACTGAAAGGCACCCCACATCAAGTCACCTACTTTGCTGAGAAGAATTTATACCCCCTTATAGTTTCAGTTCCTGTTCATAAGCCATTGAATCAAGTTCTTTCATCTCTGGTTGATCAAGAAGTTGGCCATCAGGTTGAAAATCATAATTTGGGTTCCGATGAGCAGCATCGGACTTATACAGTAGATGAATATGAGGTCCGCATTTTGGAACCAGAAAAGTCTGGTGGCCCTTGGCAAACTATGGCTACAATTCCAATGCAGAGTTCTGAAAATGCTCTAACTGTGCGAGTGGTTACATTGTTGAATACCATTACCAAAGAGAATGAAACACTTTTGGCTATTGGGACTGCTTATGTGCAAGGGGAAGATGTTGCTGCAAGAGGACGTGTGCTTTTATTTGCTGTTGGAAAAAACACCGATAATCCCCAAAATTTGGTTTCAGAGGTTTACTCAAAGGAATTGAAGGGTGCTATATCTGCTTTAGCCTCTCTTCAAGGCCATTTGTTGATAGCTTCTGGTCCTAAAATAATTTTACACAACTGGACTGGTACTGAGTTGAATGGCATTGCATTTTTCGATGCTCCTCCATTATACGTCGTGAGCTTAAATATCGTCAAGAATTTTATCCTCCTTGGGGACGTTCACAAAAGCATTTACTTTCTTAGCTGGAAGGAGCAGGGATCTCAACTTAGCTTATTAGCAAAGGATTTTGGCTCCCTTGATTGTTTTGCAACAGAGTTTTTAATTGATGGAAGTACCCTCAGCCTCATAGTTTCAGATGATCAAAAGAACATTCAGATATTTTATTATGCGCCAAAGATGTCCGAGAGTTGGAAGGGACAGAAGCTTCTTTCGAGGGCTGAGTTTCATGTTGGTGCCCATGTGACTAAGTTCTTGAGGTTGCAGATGCTTTCCACTTCATCGGACCGGAGTGGTGCAGCTCCAGGCTCTGATAAAATCAATCGATTTGCTTTGTTGTTTGGTACCTTGGACGGCAGCATTGGTTGCATTGCACCTCTTGATGAACTCACATTTCGTAGACTGCAGTCATTACAAAGAAAGCTTGTTGATGCTGTTCCCCATGTTGCTGGCCTAAATCCAAGATCTTTCCGCCAGTTCCGCACAAATGGAAAGGCCCATCGATCTGGCCCTGACAGCATAGTTGATTGTGAGCTGCTATGCAATTACGAGATGCTTCCATTGGAGGAACAGCTTGAAATCGCCAATCAGATTGGAACAACTCGTTCACATATTCTCTCAAATTTGACTGACCTCTCTTTAGGAACGAGCTTCTTGTGA

Protein:   MSFAAYKMMQWPTGIDNCASGFITHSRADFVPRIPPIQTDDLESDWTHRRGIGPVPNLVVTAANILELYVVRVQEEGSRESRSSSETKRGGVMDGISGSSLELVSHYRLHGNVESMAVLPLGVGDGSRMRDSIILTFQDAKISVLEFDDSIHGLRTSSMHCFEGPEWLHLKRGRESFARGPLVKVDPQGRCGGVLVYDLQMIILKAAQDGSGLVGDDDAFGSGVAVSARVESSFLINLRDLDMKHVKDFIFVHGYIEPVMVILHEREPTWAGRVSWKHHTCMISALSISTSMKQHPLIWSAVNLPHDAYKLLAVPSPIGGVLVIGANSIHYHSQSASCALALNNYAVPVDSSQEMPRSSFSVELDVANATWLLTDVALVSTKTGELLLLTLVYDGRVVYRLDLSKSKASVLTSGITTIGNSFFFLGSRLGDSLLVQFTCGLGSAILSSGQKEEVGDIEGDAPPVKRLRRSSSDALQDMVSGDEISLYGSAPNNADSTQKTFSFAVRDSLINVGPLKDFSYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEVELPGCTGIWTVYHKNARGQLATDDNEYHAYLIISLEARTMVLETADLLTEVTESVDYFVQGRTLAAGNLFGRRRVVQVFERGARILDGSFMTQDLNVGVPNSESGSESSTVLSVSIADPYVLLRMTDGSIRLLVGDPLTCTVSMYTPSSFETSKKFVSACTLYHDKGPEPWLRKTSTDAWLSTGISEAIDGADGAPHDQGDIYCVVCYESGALEILDVPNFNCVFSAEKFMSGNPLLVDAFMPEPAKDIEVTKRSSEEVTGQGRKESTQNMKVVELAMQRWAGQHSRPFLFGILSDGTILCYHAYLYEGAESNSRVEDSASVQNSGGLSSISASRLRNLRFVRVPLDTYAREETPSGSPCQRITIFKNIGGHQGLFLSGSRPAWFMVFRERLRVHPQLCDGCIVAFTVLHNVNCNHGLIYVTSQGILKICQLPSVSSYDNYWPVQKIPLKGTPHQVTYFAEKNLYPLIVSVPVHKPLNQVLSSLVDQEVGHQVENHNLGSDEQHRTYTVDEYEVRILEPEKSGGPWQTMATIPMQSSENALTVRVVTLLNTITKENETLLAIGTAYVQGEDVAARGRVLLFAVGKNTDNPQNLVSEVYSKELKGAISALASLQGHLLIASGPKIILHNWTGTELNGIAFFDAPPLYVVSLNIVKNFILLGDVHKSIYFLSWKEQGSQLSLLAKDFGSLDCFATEFLIDGSTLSLIVSDDQKNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTSSDRSGAAPGSDKINRFALLFGTLDGSIGCIAPLDELTFRRLQSLQRKLVDAVPHVAGLNPRSFRQFRTNGKAHRSGPDSIVDCELLCNYEMLPLEEQLEIANQIGTTRSHILSNLTDLSLGTSFL